Matthew, I have most of the numbers - I've just lost the support for them, so you'd have to take them on faith or spend hours like I did plowing through those sites I gave you.

I also encountered differences between icv2, Comichron and one other source I once found but can't locate again.  Some of the differences were a result of rounding (one source rounded everything to the nearest hundred), but some differences were greater.  I'd recommend you contact long-time CBG guy John Jackson Miller through the Comichron site and see if he can help.  He's a real comics data enthusiast and I'm guessing he'd love to talk to another numbers-cruncher.

Following is what I have of what you requested (I also included the only pre-reboot/Comicraft MMW numbers I was able to find).  These numbers were all mined several years ago, and then I lost enthusiasm for the project and lost much of the source material as well.  I'm not very mistake-prone, but given I recorded several hundred Archives and Masterworks numbers, mistakes are still a possibility (with me, and probably also with the sources).

A little tidbit about the high sales of the Comicraft FF 6:  Tom Brevoort was all over the internet back in 2000 saying he needed to hit 4K minimum (but hopefully 5K+) in pre-orders to ensure further volumes, so many of us pre-ordered and over-ordered to give the program a push.  We couldn't maintain enthusiasm, however, and pre-sales dropped sharply thereafter.  A little over a year later, the program went back on hiatus.

For what it's worth:

All-Star42655
All-Star52936
All-Star62900
All-Star72900
Batman43200
Batman53100
Black Canary12843
Blackhawk12800
Flash23100
Green Lantern23400
Green Lantern33100
GA Green Lantern13800
JLA43000
JLA53100
JLA63100
JLA72800
New Teen Titans12201
Plastic Man13248
Plastic Man23900
Plastic Man32900
Shazam23200
Spirit14000
Spirit24200
Spirit34800
Spirit43800
Spirit53800
Starman12900
Supergirl12900
Superman52800
Superman in Action33000
Superman in Action41946
Wonder Woman22900
World's Finest13362
Fantastic Four64130
Thor32800
X-Men32100
Sub-Mariner12600