They are completely separate and have absolutely nothing to do with each other, other than both feature subsets of the Legion stranded away from the main team.

Samy wants to see the following collected editions:
X-MEN: CLAREMONT/JRJR OMNIBUS, X-FORCE OMNIBUS VOL. 2, 
NEW MUTANTS OMNIBUS VOLS. 1-2, GENERATION X OMNIBUS
PUNISHER (1987) #1-18 OHC,
PUNISHER WAR JOURNAL (1988) #1-24 OHC,
X-MEN: REVOLUTION OHC
X-TREME X-MEN VOLS. 1-2 OMNIBUS, WOLVERINE: HAMA/SILVESTRI OMNIBUS,
LEGION ARCHIVES VOL. 14, KNIGHTFALL OMNIBUS
LEGION OF SUPER-HEROES: EYE FOR AN EYE DELUXE HC